PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS66715.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 153aa    MW: 17275.7 Da    PI: 7.9511
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS66715.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.91.3e-0658931555
                HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                ++ ++   L++llP++     +K++ a++Le A eYI+ Lq
  EPS66715.1 58 KLSDKTRSLQKLLPWD-----EKMDIATVLESAYEYIRFLQ 93
                67778889*******9.....8******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS508888.5054392IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.02E-64797No hitNo description
Gene3DG3DSA:4.10.280.109.1E-1057100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.66E-857101IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    Send to blast
DDAYLNGAFA DVSFRSLLTY CSPPNPVYQT IPPDSHFPAK MMPYHHQKRR KLLPPQQKLS  60
DKTRSLQKLL PWDEKMDIAT VLESAYEYIR FLQAQVRALQ SMPSLACSSS PASYGTTILG  120
NLNQQQLLQV MINSESAQSH LYSTGCCVYS IDQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012830415.11e-39PREDICTED: transcription factor bHLH117
TrEMBLS8CJ041e-111S8CJ04_9LAMI; Uncharacterized protein (Fragment)
STRINGPGSC0003DMT4000672877e-30(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA112501821
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22100.12e-19bHLH family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]